Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908689.1_cds_XP_016458865.1_52453
CDS Infomation

[gene=LOC107782498] [db_xref=GeneID:107782498] [protein=abscisic acid 8'-hydroxylase 3-like] [protein_id=XP_016458865.1] [location=join(66755..66960,67360..67678,67762..67914,67992..68270,68360..68446,68537..68615,68703..68809,68895..69013,69154..69244)] [gbkey=CDS]
Sequence

ATGGAACTAATCATGTTAATGGTGATTGTGGTAGTTTTGGTTTTACTAGTTTTAGCAGTC
TTACTGAAAACAAGGGATTCTCCAAAAGAAATGGAAGCAATTCCAGGTACCCTGGGATGG
CCTATTATTGGAGAGAGCTTGTCTTTCATATCTGAATTCTCAAGCCGTGCTGGTATATAC
AGCTTCATTAACAAGAGACAGAAACTGTATGGGAAGGTGTTCAAGAGTTATGTATTGGGA
AGGTACACTGTATTCATGGCTGGAAGAGAAGCAAGTAAAATCTTGTTGACAGGAAAAGAT
GGAATGGTGAGCTTAAACCTTTTCTACACAGGACAGCAAGTACTTGGACCTACTAGCTTG
CTCCAACAGACGGGAGAGTCGCACAAGAGACTCCGAAAAGTAATTGCTGAACCACTTTCA
CTTGATGGACTTAAGAAGTATTTTCAATTTATCAACAGCTTAGCTATTGAAACATTGGAT
CAGTGGTCTGGAAGAAAAGTCTTGGTTCTTGAAGAAGCTTCCACATTCACACTCAAGGTG
ATAGGCAATATGATAATGAGCTTAGATCCAACTGGTCAGGAACAAGAGAAATTTCGAACC
AATTTCAAGATTATTTCTGCCTCTTTTTCTTCCTTACCCTTTAAGGTCCCGGGAACTGCA
TTTTATCGTGGCATTCAGGCTCGTGATCGAATGTATGCTCTGTTAGACTCGATAATTGAC
CAACGGAGAAGTGGGAAAAGCTTGAAACAAGATTTCTTGCAATCCCTGGTAAAGAAGCAT
GGCAAAGATGCATCAGAAGGAGATGATGATGATGATGATGATGATAAACTCACCGATAAA
CAACTGAAGGATAACATATTAACACTGCTAGTTGCAGGACATGATACTACAACTGCTGCT
TTGACATGGCTCGTCAAATATATTCAAGAAAATCCTGTTGTATTGGAACGATTAAGGGAG
GAACATAGAGAAATTCAAGCTCGAAAACAAGGCACATTAGATCTTGCCTGGTCTGAAGTC
AACAATATGCCTTACACCGCCAAAGTAATAAGTGAAACTCTTAGAATGGCAACAATCCTG
CCTTGGTTTTCAAGAAAAGCAGCAATGGATTTTGAAATTGATGGATTCAAAATCAAGAAG
GGATGGTCTCTTAACTTGGATGTAGTGTCTATCCACCGCGACCCCAAGATTTTTGTTAAT
CCTGAGAAGTTTGATCCTTCTAGATTTGATGGGCCTCTAAAACCTTTCAGCTTCCTTGGA
TTTGGAAGCGGACCACGAATGTGTCCTGGAATCAACCTCGCCAAACTGGAAATTTCTGTT
TTCCTTCATCATCTTGTCTGCAGATACAAATGGACACCTTTAGACACAGACGATTCTGTT
CAGCCAACACTTGTCAGGATGCCGAAGAACAAGTATCCCGTCATGGTTGAGACACTTTAG

Peptide Sequence

PEP ID

XP_016458865.1
PEP Infomation

PREDICTED: abscisic acid 8'-hydroxylase 3-like [Nicotiana tabacum]
Sequence

MELIMLMVIVVVLVLLVLAVLLKTRDSPKEMEAIPGTLGWPIIGESLSFISEFSSRAGIY
SFINKRQKLYGKVFKSYVLGRYTVFMAGREASKILLTGKDGMVSLNLFYTGQQVLGPTSL
LQQTGESHKRLRKVIAEPLSLDGLKKYFQFINSLAIETLDQWSGRKVLVLEEASTFTLKV
IGNMIMSLDPTGQEQEKFRTNFKIISASFSSLPFKVPGTAFYRGIQARDRMYALLDSIID
QRRSGKSLKQDFLQSLVKKHGKDASEGDDDDDDDDKLTDKQLKDNILTLLVAGHDTTTAA
LTWLVKYIQENPVVLERLREEHREIQARKQGTLDLAWSEVNNMPYTAKVISETLRMATIL
PWFSRKAAMDFEIDGFKIKKGWSLNLDVVSIHRDPKIFVNPEKFDPSRFDGPLKPFSFLG
FGSGPRMCPGINLAKLEISVFLHHLVCRYKWTPLDTDDSVQPTLVRMPKNKYPVMVETL

Transcript Sequence

Gene sequence data has not been registered.